The period of time when you are in the Czech Republic on a long-term residence permit does not count toward the 90/180 quota. You might need to prove your long-term residence permit upon your return to Malaysia, i.e. upon leaving the Czech Republic (border control may suspect that you are returning not as a tourist but rather illegally overstayed your long-term residence permit).
Hello,
Thank you sooooo much for the reply.
So from my understanding of your post, I might have problems when I will be leaving Czech Republic for good during October, BUT not when I am trying to enter Czech Republic from Malaysia on the 26th of this month (before my long term residence permit is ended)?
If so, how do I prove that I am not intentionally prolonging my stay?